Publications

Puga I, Cols M, Barra CM, He B, Cassis L, Gentile M, Comerma L, Chorny A, Shan M, Xu W et al..  2011.  B cell-helper neutrophils stimulate the diversification and production of immunoglobulin in the marginal zone of the spleen.. Nat Immunol. 13(2):170-80.

Liu Z, Yang M, Peterfreund GL, Tsou AM, Selamoglu N, Daldal F, Zhong Z, Kan B, Zhu J.  2011.  Vibrio cholerae anaerobic induction of virulence gene expression is controlled by thiol-based switches of virulence regulator AphB.. Proc Natl Acad Sci U S A. 108(2):810-5.

Shan M, Gentile M, Yeiser JR, A Walland C, Bornstein VU, Chen K, He B, Cassis L, Bigas A, Cols M et al..  2013.  Mucus enhances gut homeostasis and oral tolerance by delivering immunoregulatory signals.. Science. 342(6157):447-53.

Wei X, Das J, Fragoza R, Liang J, de Oliveira FMBastos, Lee HRan, Wang X, Mort M, Stenson PD, Cooper DN et al..  2014.  A massively parallel pipeline to clone DNA variants and examine molecular phenotypes of human disease mutations.. PLoS Genet. 10(12):e1004819.

Bergstrom KSB, Morampudi V, Chan JM, Bhinder G, Lau J, Yang H, Ma C, Huang T, Ryz N, Sham HPan et al..  2015.  Goblet Cell Derived RELM-β Recruits CD4+ T Cells during Infectious Colitis to Promote Protective Intestinal Epithelial Cell Proliferation.. PLoS Pathog. 11(8):e1005108.

Monticelli LA, Buck MD, Flamar A-L, Saenz SA, Wojno EDTait, Yudanin NA, Osborne LC, Hepworth MR, Tran SV, Rodewald H-R et al..  2016.  Arginase 1 is an innate lymphoid-cell-intrinsic metabolic checkpoint controlling type 2 inflammation.. Nat Immunol. 17(6):656-65.

Chorny A, Casas-Recasens S, Sintes J, Shan M, Polentarutti N, García-Escudero R, A Walland C, Yeiser JR, Cassis L, Carrillo J et al..  2016.  The soluble pattern recognition receptor PTX3 links humoral innate and adaptive immune responses by helping marginal zone B cells.. J Exp Med. 213(10):2167-85.

Chen S, Beltrán JF, Esteban-Jurado C, Franch-Expósito S, Castellví-Bel S, Lipkin S, Wei X, Yu H.  2017.  GeMSTONE: orchestrated prioritization of human germline mutations in the cloud.. Nucleic Acids Res. 45(W1):W207-W214.

Mandelker D, Zhang L, Kemel Y, Stadler ZK, Joseph V, Zehir A, Pradhan N, Arnold A, Walsh MF, Li Y et al..  2017.  Mutation Detection in Patients With Advanced Cancer by Universal Sequencing of Cancer-Related Genes in Tumor and Normal DNA vs Guideline-Based Germline Testing.. JAMA. 318(9):825-835.

Moretti J, Roy S, Bozec D, Martinez J, Chapman JR, Ueberheide B, Lamming DW, Chen ZJ, Horng T, Yeretssian G et al..  2017.  STING Senses Microbial Viability to Orchestrate Stress-Mediated Autophagy of the Endoplasmic Reticulum.. Cell. 171(4):809-823.e13.

Wei X, M Calvo-Vidal N, Chen S, Wu G, Revuelta MV, Sun J, Zhang J, Walsh MF, Nichols KE, Joseph V et al..  2018.  Germline Lysine-Specific Demethylase 1 () Mutations Confer Susceptibility to Multiple Myeloma.. Cancer Res. 78(10):2747-2759.

Lencz T, Yu J, Palmer C, Carmi S, Ben-Avraham D, Barzilai N, Bressman S, Darvasi A, Cho JH, Clark LN et al..  2018.  High-depth whole genome sequencing of an Ashkenazi Jewish reference panel: enhancing sensitivity, accuracy, and imputation.. Hum Genet. 137(4):343-355.

Shan M, Carrillo J, Yeste A, Gutzeit C, Segura-Garzón D, A Walland C, Pybus M, Grasset EK, Yeiser JR, Matthews DB et al..  2018.  Secreted IgD Amplifies Humoral T Helper 2 Cell Responses by Binding Basophils via Galectin-9 and CD44.. Immunity. 49(4):709-724.e8.

Shan M, Carrillo J, Yeste A, Gutzeit C, Segura-Garzón D, A Walland C, Pybus M, Grasset EK, Yeiser JR, Matthews DB et al..  2018.  Secreted IgD Amplifies Humoral T Helper 2 Cell Responses by Binding Basophils via Galectin-9 and CD44.. Immunity. 49(4):709-724.e8.

Moriyama S, Brestoff JR, Flamar A-L, Moeller JB, Klose CSN, Rankin LC, Yudanin NA, Monticelli LA, Putzel GGarbès, Rodewald H-R et al..  2018.  β-adrenergic receptor-mediated negative regulation of group 2 innate lymphoid cell responses.. Science. 359(6379):1056-1061.

Harrison OJ, Linehan JL, Shih H-Y, Bouladoux N, Han S-J, Smelkinson M, Sen SK, Byrd AL, Enamorado M, Yao C et al..  2019.  Commensal-specific T cell plasticity promotes rapid tissue adaptation to injury.. Science. 363(6422)

Witherspoon M, Sandu D, Lu C, Wang K, Edwards R, Yeung A, Gelincik O, Manfredi G, Gross S, Kopelovich L et al..  2019.  ETHE1 overexpression promotes SIRT1 and PGC1α mediated aerobic glycolysis, oxidative phosphorylation, mitochondrial biogenesis and colorectal cancer.. Oncotarget. 10(40):4004-4017.

Rosshart SP, Herz J, Vassallo BG, Hunter A, Wall MK, Badger JH, McCulloch JA, Anastasakis DG, Sarshad AA, Leonardi I et al..  2019.  Laboratory mice born to wild mice have natural microbiota and model human immune responses.. Science. 365(6452)

Chu C, Murdock MH, Jing D, Won THyung, Chung H, Kressel AM, Tsaava T, Addorisio ME, Putzel GG, Zhou L et al..  2019.  The microbiota regulate neuronal function and fear extinction learning.. Nature. 574(7779):543-548.

Nagashima H, Mahlakõiv T, Shih H-Y, Davis FP, Meylan F, Huang Y, Harrison OJ, Yao C, Mikami Y, Urban JF et al..  2019.  Neuropeptide CGRP Limits Group 2 Innate Lymphoid Cell Responses and Constrains Type 2 Inflammation.. Immunity.

Yudanin NA, Schmitz F, Flamar A-L, Thome JJC, Wojno ETait, Moeller JB, Schirmer M, Latorre IJ, Xavier RJ, Farber DL et al..  2019.  Spatial and Temporal Mapping of Human Innate Lymphoid Cells Reveals Elements of Tissue Specificity.. Immunity. 50(2):505-519.e4.

Chu C, Parkhurst CN, Zhang W, Zhou L, Yano H, Arifuzzaman M, Artis D.  2021.  The ChAT-acetylcholine pathway promotes group 2 innate lymphoid cell responses and anti-helminth immunity.. Sci Immunol. 6(57)

Lima-Junior DS, Krishnamurthy SR, Disease CBiblio _ T, Collins N, Han S-J, Chen EY, Constantinides MG, Link VM, Lim AIng, Enamorado M et al..  2021.  Endogenous retroviruses promote homeostatic and inflammatory responses to the microbiota.. Cell. 184(14):3794-3811.e19.

Barbet G, Nair-Gupta P, Schotsaert M, Yeung ST, Moretti J, Seyffer F, Metreveli G, Gardner T, Choi A, Tortorella D et al..  2021.  TAP dysfunction in dendritic cells enables noncanonical cross-presentation for T cell priming.. Nat Immunol. 22(4):497-509.

Moretti J, Jia B, Hutchins Z, Roy S, Yip H, Wu J, Shan M, Jaffrey SR, Coers J, J Blander M.  2022.  Caspase-11 interaction with NLRP3 potentiates the noncanonical activation of the NLRP3 inflammasome.. Nat Immunol. 23(5):705-717.