Publications

Cong J, Liu P, Han Z, Ying W, Li C, Yang Y, Wang S, Yang J, Cao F, Shen J et al..  2024.  Bile acids modified by the intestinal microbiota promote colorectal cancer growth by suppressing CD8+ T cell effector functions.. Immunity. 57(4):876-889.e11.

Arifuzzaman M, Won THyung, Yano H, Uddin J, Emanuel ER, Hu E, Zhang W, Li T-T, Jin W-B, Grier A et al..  2024.  Dietary fiber is a critical determinant of pathologic ILC2 responses and intestinal inflammation.. J Exp Med. 221(5)

Sanidad KZ, Rager SL, Carrow HC, Ananthanarayanan A, Callaghan R, Hart LR, Li T, Ravisankar P, Brown JA, Amir M et al..  2024.  Gut bacteria-derived serotonin promotes immune tolerance in early life.. Sci Immunol. 9(93):eadj4775.

Fan T, Tai C, Sleiman KC, Cutcliffe MP, Kim H, Liu Y, Li J, Xin G, Grashel M, Baert L et al..  2025.  Aberrant T follicular helper cells generated by TH17 cell plasticity in the gut promote extraintestinal autoimmunity.. Nat Immunol. 26(5):790-804.

Falloon K, Dossaji Z, Mude P, Abushamma S, Ananthakrishnan A, Barnes EL, Bhalla J, Bhattacharya A, Cheemalavagu S, Colombel J-F et al..  2025.  Diagnosis of Inflammatory Bowel Disease-Associated Peripheral Arthritis: A Systematic Review.. Inflamm Bowel Dis. 31(3):812-842.

Falloon K, Dossaji Z, Mude P, Abushamma S, Ananthakrishnan A, Barnes EL, Bhalla J, Bhattacharya A, Cheemalavagu S, Colombel J-F et al..  2025.  Diagnosis of Inflammatory Bowel Disease-Associated Peripheral Arthritis: A Systematic Review.. Inflamm Bowel Dis. 31(3):812-842.

Case NT, Gurr SJ, Fisher MC, Blehert DS, Boone C, Casadevall A, Chowdhary A, Cuomo CA, Currie CR, Denning DW et al..  2025.  Fungal impacts on Earth's ecosystems.. Nature. 638(8049):49-57.

Case NT, Gurr SJ, Fisher MC, Blehert DS, Boone C, Casadevall A, Chowdhary A, Cuomo CA, Currie CR, Denning DW et al..  2025.  Fungal impacts on Earth's ecosystems.. Nature. 638(8049):49-57.

Case NT, Gurr SJ, Fisher MC, Blehert DS, Boone C, Casadevall A, Chowdhary A, Cuomo CA, Currie CR, Denning DW et al..  2025.  Fungal impacts on Earth's ecosystems.. Nature. 638(8049):49-57.

Zhao FR, Kleverov M, Winkler ES, Williams RB, Janova H, Droit L, Wang L, Li T-T, Heath L, Jung A et al..  2025.  Gut microbe-derived short-chain fatty acids regulate joint inflammation and activation of infiltrating and resident myeloid cells after alphavirus infection.. bioRxiv.

Won THyung, Arifuzzaman M, Parkhurst CN, Miranda IC, Zhang B, Hu E, Kashyap S, Letourneau J, Jin W-B, Fu Y et al..  2025.  Host metabolism balances microbial regulation of bile acid signalling.. Nature. 638(8049):216-224.

Zhou W, Zhou JZ, Ahmed A, Kim MJoon, Guo C-J, Sonnenberg GF.  2025.  ILC3s sense gut microbiota through STING to initiate immune tolerance.. Immunity. 58(7):1762-1777.e7.

Liu EY, An A, Khan S, Battat R, Longman R, Scherl E, Sahyoun L, Lukin DJ.  2025.  The Impact of Endoscopic Healing on Disease-Related Outcomes in Patients With Ulcerative Proctitis.. Inflamm Bowel Dis. 31(10):2725-2734.

Feagan BG, Sands BE, Siegel CA, Dubinsky MC, Longman RS, Sabino J, Laurent O, Luo A, Lu J, Nguyen DD et al..  2025.  Safety and efficacy of the anti-TL1A monoclonal antibody tulisokibart for Crohn's disease: a phase 2a induction trial.. Lancet Gastroenterol Hepatol. 10(8):715-725.

Feagan BG, Sands BE, Siegel CA, Dubinsky MC, Longman RS, Sabino J, Laurent O, Luo A, Lu J, Nguyen DD et al..  2025.  Safety and efficacy of the anti-TL1A monoclonal antibody tulisokibart for Crohn's disease: a phase 2a induction trial.. Lancet Gastroenterol Hepatol. 10(8):715-725.

Barnich N, Arthur JC, Buisson A, Campbell BJ, Carbonnel F, Chassaing B, Coombes BK, Denizot J, Dogan B, Faith J et al..  2026.  Adherent-invasive Escherichia coli in Crohn's disease: the 25th anniversary.. Gut. 75(2):411-424.

Martini GRios, Hofmann P, Kamps A-K, Weichberger A, Tikhonova E, Conroy A, Pan X, Namuch DMilagros, Rathjens L, Bergfeld A et al..  2026.  Antigen-restricted Candida albicans Th17 cells link oral-gut immunity and adopt pathogenic features during intestinal inflammation.. Immunity. 59(9):2545-2561.e10.

Kim S, Kim H, Yim YShin, Ha S, Atarashi K, Tan TGuan, Longman RS, Honda K, Littman DR, Choi GB et al..  2026.  Editorial Expression of Concern: Maternal gut bacteria promote neurodevelopmental abnormalities in mouse offspring.. Nature. 658(8137):E7.

Kim S, Kim H, Yim YShin, Ha S, Atarashi K, Tan TGuan, Longman RS, Honda K, Littman DR, Choi GB et al..  2026.  Editorial Expression of Concern: Maternal gut bacteria promote neurodevelopmental abnormalities in mouse offspring.. Nature. 658(8137):E7.

Zhao FR, Kleverov M, Winkler ES, Williams RB, Janova H, Droit L, Wang L, Li T-T, Heath L, Jung A et al..  2026.  Gut microbe-derived short-chain fatty acids regulate alphavirus arthritis and macrophage activation in mice.. J Clin Invest. 136(14)

Li Z, Liu S, Jin W, Xiao L, Kester O, Bullen N, Chen X, Chan UIn, Owiredu J, Li Z et al..  2026.  Isoleucine and valine promote prostate cancer progression via propionyl-CoA-mediated cholesterol metabolism.. Nat Metab. 8(8):1772-1790.

Li Z, Liu S, Jin W, Xiao L, Kester O, Bullen N, Chen X, Chan UIn, Owiredu J, Li Z et al..  2026.  Isoleucine and valine promote prostate cancer progression via propionyl-CoA-mediated cholesterol metabolism.. Nat Metab. 8(8):1772-1790.

Li Z, Liu S, Jin W, Xiao L, Kester O, Bullen N, Chen X, Chan UIn, Owiredu J, Li Z et al..  2026.  Isoleucine and valine promote prostate cancer progression via propionyl-CoA-mediated cholesterol metabolism.. Nat Metab. 8(8):1772-1790.

Kethidi N, Pothukuchi S, Aleman A, Charytonowicz D, Kuhn C, Wong T, Claytor J, Canales-Herrerias P, Khoshbakht S, Acharya A et al..  2026.  Persistence of mucosal CAR-T cells and inflammatory remodeling in enterocolitis associated with BCMA CAR-T cell therapy.. Nat Med.

Kethidi N, Pothukuchi S, Aleman A, Charytonowicz D, Kuhn C, Wong T, Claytor J, Canales-Herrerias P, Khoshbakht S, Acharya A et al..  2026.  Persistence of mucosal CAR-T cells and inflammatory remodeling in enterocolitis associated with BCMA CAR-T cell therapy.. Nat Med.