Publications

Pertesi M, Vallée M, Wei X, Revuelta MV, Galia P, Demangel D, Oliver J, Foll M, Chen S, Perrial E et al..  2019.  Exome sequencing identifies germline variants in DIS3 in familial multiple myeloma.. Leukemia. 33(9):2324-2330.

Pertesi M, Vallée M, Wei X, Revuelta MV, Galia P, Demangel D, Oliver J, Foll M, Chen S, Perrial E et al..  2019.  Exome sequencing identifies germline variants in DIS3 in familial multiple myeloma.. Leukemia. 33(9):2324-2330.

Pertesi M, Vallée M, Wei X, Revuelta MV, Galia P, Demangel D, Oliver J, Foll M, Chen S, Perrial E et al..  2019.  Exome sequencing identifies germline variants in DIS3 in familial multiple myeloma.. Leukemia. 33(9):2324-2330.

Gogokhia L, Buhrke K, Bell R, Hoffman B, D Brown G, Hanke-Gogokhia C, Ajami NJ, Wong MC, Ghazaryan A, Valentine JF et al..  2019.  Expansion of Bacteriophages Is Linked to Aggravated Intestinal Inflammation and Colitis.. Cell Host Microbe. 25(2):285-299.e8.

Zhou L, Chu C, Teng F, Bessman NJ, Goc J, Santosa EK, Putzel GG, Kabata H, Kelsen JR, Baldassano RN et al..  2019.  Innate lymphoid cells support regulatory T cells in the intestine through interleukin-2.. Nature. 568(7752):405-409.

Rosshart SP, Herz J, Vassallo BG, Hunter A, Wall MK, Badger JH, McCulloch JA, Anastasakis DG, Sarshad AA, Leonardi I et al..  2019.  Laboratory mice born to wild mice have natural microbiota and model human immune responses.. Science. 365(6452)

Pascutti MFernanda, Geerman S, Collins N, Brasser G, Nota B, Stark R, Behr F, Oja A, Slot E, Panagioti E et al..  2019.  Peripheral and systemic antigens elicit an expandable pool of resident memory CD8+ T cells in the bone marrow.. Eur J Immunol. 49(6):853-872.

Ravichandran V, Shameer Z, Kemel Y, Walsh M, Cadoo K, Lipkin S, Mandelker D, Zhang L, Stadler Z, Robson M et al..  2019.  Toward automation of germline variant curation in clinical cancer genetics.. Genet Med. 21(9):2116-2125.

Offit K, Tkachuk KA, Stadler ZK, Walsh MF, Diaz-Zabala H, Levin JD, Steinsnyder Z, Ravichandran V, Sharaf RN, Frey MK et al..  2020.  Cascading After Peridiagnostic Cancer Genetic Testing: An Alternative to Population-Based Screening.. J Clin Oncol. :JCO1902010.

Bessman NJ, Mathieu JRR, Renassia C, Zhou L, Fung TC, Fernandez KC, Austin C, Moeller JB, Zumerle S, Louis S et al..  2020.  Dendritic cell-derived hepcidin sequesters iron from the microbiota to promote mucosal healing.. Science. 368(6487):186-189.

Willis JA, Reyes-Uribe L, Chang K, Lipkin SM, Vilar E.  2020.  Immune Activation in Mismatch Repair-Deficient Carcinogenesis: More Than Just Mutational Rate.. Clin Cancer Res. 26(1):11-17.

Chikina AS, Nadalin F, Maurin M, San-Roman M, Thomas-Bonafos T, Li XV, Lameiras S, Baulande S, Henri S, Malissen B et al..  2020.  Macrophages Maintain Epithelium Integrity by Limiting Fungal Product Absorption.. Cell.

Vasanthakumar A, Chisanga D, Blume J, Gloury R, Britt K, Henstridge DC, Zhan Y, Torres SValle, Liene S, Collins N et al..  2020.  Sex-specific adipose tissue imprinting of regulatory T cells.. Nature. 579(7800):581-585.

Viladomiu M, Metz ML, Lima SF, Jin W-B, Chou L, Guo C-J, Diehl GE, Simpson KW, Scherl EJ, Longman RS.  2021.  Adherent-invasive E. coli metabolism of propanediol in Crohn's disease regulates phagocytes to drive intestinal inflammation.. Cell Host Microbe.

Grigg JB, Shanmugavadivu A, Regen T, Parkhurst CN, Ahmed A, Joseph AM, Mazzucco M, Gronke K, Diefenbach A, Eberl G et al..  2021.  Antigen-presenting innate lymphoid cells orchestrate neuroinflammation.. Nature.

Viladomiu M, Longman RS.  2021.  Decoding the matrix: multiomics reveals host-microbe biomarker for inflammatory bowel disease.. J Clin Invest. 131(9)

Lima S, Gogokhia L, Viladomiu M, Chou L, Putzel G, Jin W, Pires S, Guo C-J, Gerardin Y, Crawford CV et al..  2021.  Transferable IgA-coated Odoribacter splanchnicus in Responders to Fecal Microbiota Transplantation for Ulcerative Colitis Limits Colonic Inflammation.. Gastroenterology.

Viladomiu M, Khounlotham M, Dogan B, Lima SF, Elsaadi A, Cardakli E, Castellanos JG, Ng C, Herzog J, Schoenborn AA et al..  2022.  Agr2-associated ER stress promotes adherent-invasive E. coli dysbiosis and triggers CD103+ dendritic cell IL-23-dependent ileocolitis.. Cell Rep. 41(7):111637.

Liebhoff A-M, Venkataraman T, Morgenlander WR, Na M, Kula T, Waugh K, Morrison C, Rewers M, Longman R, Round J et al..  2023.  Efficient encoding of large antigenic spaces by epitope prioritization with Dolphyn.. bioRxiv.

Ma Y, Sannino D, Linden JR, Haigh S, Zhao B, Grigg JB, Zumbo P, Dündar F, Butler D, Profaci CP et al..  2023.  Epsilon toxin-producing Clostridium perfringens colonize the multiple sclerosis gut microbiome overcoming CNS immune privilege.. J Clin Invest. 133(9)

Sargsian S, Lejeune A, Ercelen D, Jin W-B, Varghese A, Loke P'ng, Lim YAL, Guo C-J, Cadwell K.  2023.  Functional characterization of helminth-associated Clostridiales reveals covariates of Treg differentiation.. bioRxiv.

Awasthi D, Chopra S, Cho BA, Emmanuelli A, Sandoval TA, Hwang S-M, Chae C-S, Salvagno C, Tan C, Vasquez-Urbina L et al..  2023.  Inflammatory ER stress responses dictate the immunopathogenic progression of systemic candidiasis.. J Clin Invest. 133(17)

Tamari M, Del Bel KL, Heul AMVer, Zamidar L, Orimo K, Hoshi M, Trier AM, Yano H, Yang T-L, Biggs CM et al..  2023.  Sensory neurons promote immune homeostasis in the lung.. Cell.

Venturelli OS, Wang HH, Estrela S, Huang KCasey, Ledesma-Amaro R, Fedorec AJH, Stecher B, Lawson CE, Zarrinpar A, Guo C-J et al..  2023.  What is the key challenge in engineering microbiomes? Cell Syst. 14(2):85-90.

Ahmed A, Joseph AM, Zhou J, Horn V, Uddin J, Lyu M, Goc J, Sockolow RE, Wing JB, Vivier E et al..  2024.  CTLA-4-expressing ILC3s restrain interleukin-23-mediated inflammation.. Nature. 630(8018):976-983.